from __future__ import division import numpy as np import scipy.sparse as sp from scipy.misc import comb as combinations from numpy.testing import assert_array_almost_equal from sklearn.utils.random import sample_without_replacement from sklearn.utils.random import random_choice_csc from sklearn.utils.testing import ( assert_raises, assert_equal, assert_true) ############################################################################### # test custom sampling without replacement algorithm ############################################################################### def test_invalid_sample_without_replacement_algorithm(): assert_raises(ValueError, sample_without_replacement, 5, 4, "unknown") def test_sample_without_replacement_algorithms(): methods = ("auto", "tracking_selection", "reservoir_sampling", "pool") for m in methods: def sample_without_replacement_method(n_population, n_samples, random_state=None): return sample_without_replacement(n_population, n_samples, method=m, random_state=random_state) check_edge_case_of_sample_int(sample_without_replacement_method) check_sample_int(sample_without_replacement_method) check_sample_int_distribution(sample_without_replacement_method) def check_edge_case_of_sample_int(sample_without_replacement): # n_population < n_sample assert_raises(ValueError, sample_without_replacement, 0, 1) assert_raises(ValueError, sample_without_replacement, 1, 2) # n_population == n_samples assert_equal(sample_without_replacement(0, 0).shape, (0, )) assert_equal(sample_without_replacement(1, 1).shape, (1, )) # n_population >= n_samples assert_equal(sample_without_replacement(5, 0).shape, (0, )) assert_equal(sample_without_replacement(5, 1).shape, (1, )) # n_population < 0 or n_samples < 0 assert_raises(ValueError, sample_without_replacement, -1, 5) assert_raises(ValueError, sample_without_replacement, 5, -1) def check_sample_int(sample_without_replacement): # This test is heavily inspired from test_random.py of python-core. # # For the entire allowable range of 0 <= k <= N, validate that # the sample is of the correct length and contains only unique items n_population = 100 for n_samples in range(n_population + 1): s = sample_without_replacement(n_population, n_samples) assert_equal(len(s), n_samples) unique = np.unique(s) assert_equal(np.size(unique), n_samples) assert_true(np.all(unique < n_population)) # test edge case n_population == n_samples == 0 assert_equal(np.size(sample_without_replacement(0, 0)), 0) def check_sample_int_distribution(sample_without_replacement): # This test is heavily inspired from test_random.py of python-core. # # For the entire allowable range of 0 <= k <= N, validate that # sample generates all possible permutations n_population = 10 # a large number of trials prevents false negatives without slowing normal # case n_trials = 10000 for n_samples in range(n_population): # Counting the number of combinations is not as good as counting the # the number of permutations. However, it works with sampling algorithm # that does not provide a random permutation of the subset of integer. n_expected = combinations(n_population, n_samples, exact=True) output = {} for i in range(n_trials): output[frozenset(sample_without_replacement(n_population, n_samples))] = None if len(output) == n_expected: break else: raise AssertionError( "number of combinations != number of expected (%s != %s)" % (len(output), n_expected)) def test_random_choice_csc(n_samples=10000, random_state=24): # Explicit class probabilities classes = [np.array([0, 1]), np.array([0, 1, 2])] class_probabilites = [np.array([0.5, 0.5]), np.array([0.6, 0.1, 0.3])] got = random_choice_csc(n_samples, classes, class_probabilites, random_state) assert_true(sp.issparse(got)) for k in range(len(classes)): p = np.bincount(got.getcol(k).toarray().ravel()) / float(n_samples) assert_array_almost_equal(class_probabilites[k], p, decimal=1) # Implicit class probabilities classes = [[0, 1], [1, 2]] # test for array-like support class_probabilites = [np.array([0.5, 0.5]), np.array([0, 1/2, 1/2])] got = random_choice_csc(n_samples=n_samples, classes=classes, random_state=random_state) assert_true(sp.issparse(got)) for k in range(len(classes)): p = np.bincount(got.getcol(k).toarray().ravel()) / float(n_samples) assert_array_almost_equal(class_probabilites[k], p, decimal=1) # Edge case probabilities 1.0 and 0.0 classes = [np.array([0, 1]), np.array([0, 1, 2])] class_probabilites = [np.array([1.0, 0.0]), np.array([0.0, 1.0, 0.0])] got = random_choice_csc(n_samples, classes, class_probabilites, random_state) assert_true(sp.issparse(got)) for k in range(len(classes)): p = np.bincount(got.getcol(k).toarray().ravel(), minlength=len(class_probabilites[k])) / n_samples assert_array_almost_equal(class_probabilites[k], p, decimal=1) # One class target data classes = [[1], [0]] # test for array-like support class_probabilites = [np.array([0.0, 1.0]), np.array([1.0])] got = random_choice_csc(n_samples=n_samples, classes=classes, random_state=random_state) assert_true(sp.issparse(got)) for k in range(len(classes)): p = np.bincount(got.getcol(k).toarray().ravel()) / n_samples assert_array_almost_equal(class_probabilites[k], p, decimal=1) def test_random_choice_csc_errors(): # the length of an array in classes and class_probabilites is mismatched classes = [np.array([0, 1]), np.array([0, 1, 2, 3])] class_probabilites = [np.array([0.5, 0.5]), np.array([0.6, 0.1, 0.3])] assert_raises(ValueError, random_choice_csc, 4, classes, class_probabilites, 1) # the class dtype is not supported classes = [np.array(["a", "1"]), np.array(["z", "1", "2"])] class_probabilites = [np.array([0.5, 0.5]), np.array([0.6, 0.1, 0.3])] assert_raises(ValueError, random_choice_csc, 4, classes, class_probabilites, 1) # the class dtype is not supported classes = [np.array([4.2, 0.1]), np.array([0.1, 0.2, 9.4])] class_probabilites = [np.array([0.5, 0.5]), np.array([0.6, 0.1, 0.3])] assert_raises(ValueError, random_choice_csc, 4, classes, class_probabilites, 1) # Given probabilities don't sum to 1 classes = [np.array([0, 1]), np.array([0, 1, 2])] class_probabilites = [np.array([0.5, 0.6]), np.array([0.6, 0.1, 0.3])] assert_raises(ValueError, random_choice_csc, 4, classes, class_probabilites, 1)